Phylogenetic study of some Aporrectodea species based on molecular markers
نویسندگان
چکیده
The Nicodrilus genus is not accepted in the nomenclature according to ICZN; Aporrectodea term is used. However, according to Bouché, Aporrectodea and Allolobophora genera are not homogeneous and are supposed as polyphyletic genera. The aim is to study the phylogenetic structure of Aporrectodea genus in order to verify its cladistic nature and its taxonomical validity. In this work, five species, belonging to the Aporrectodea genus, as the most common in France are studied. First, we use usual morphological characteristics to identify each species. Species life history traits are included among morphological characteristics (e.g. clitellum, puberculum and pores position, Morren’s gland, body size...). Then, we pursue a molecular approach on individuals sampled in France. Molecular phylogenetic analyses are based on the sequences of nuclear (rDNA 28S) and mitochondrial (COI, rDNA 16S) gene regions and performed with maximum likelihood and bayesian inference. Phylogenetic analyses revealed two deep sister clades, Aporrectodea caliginosa species complex in one hand, and A. giardi, A. longa and A. nocturna in the other hand. The status of A. nocturna is recognized instead of A. longa and A. giardi ones. Our study cannot confirm the validity of Aporrectodea genus but highlights different lineages within species such as A. longa and A. caliginosa. Markers characterization ensures a molecular genotyping in lumbricids and begins to reveal intra-specific variabilities degrees unsuspected.
منابع مشابه
Study of Genetic Diversity of Some Allium L. Species Based on ISSR Markers in Kurdistan Province
Genus Allium L. contains very taxonomically complex sections, especially the subgenus Melanocrommyum. The systematic position of the species in each section has been revised many times over time. In the present study, the relationship between 32 ecotypes belonging to 10 different species of Allium was investigated using ISSR markers. The nine primers used produced 166 polymorphic bands (average...
متن کاملEvaluation of genetic relationship between 15 bamboo species of North-East India based on ISSR marker analysis
The classification of bamboos based on floral morphology and reproductive characters is very hard due to erratic flowering behavior and unusually long reproductive cycle. The application of reliable and effective DNA molecular markers is highly essential to address this problem. In the present investigation, inter-simple sequence repeats (ISSR) markers were employed to study phylogenetic relati...
متن کاملAnalysis of genetic diversity, phylogenetic relationships and population structure of Arasbaran cornelian cherry (Cornus mas L.) genotypes using ISSR molecular markers
Cornelian cherry (Cornus mas L.), considered as the ancestor of cultivated trees in Arasbaran region, is a medicinally and economically plant species. However, little is known about genetic diversity, breeding programs, and population structure of this species in mentioned region. Keeping this in view, the main objectives of present study were to analysis the genetic diversity, phyloge...
متن کاملAssessment of Genetic Structure and Variation of Native Berberis Populations of Khorasan Provinces (Iran) Using AFLP Markers Versus Morphological Markers
Seedless barberry (Berberis vulgaris L. var. asperma) is one of the few crops that is only cultivated in eastern parts of Iran. As a new crop there has not been any study to identify phylogenetic relationships of this plant with other related species existing in Iran. In this study, Amplification fragment length polymorphism (AFLP) markers based on four selected primer combinations (EcoRI/Tru1I...
متن کاملPhylogenetic Analysis of some Iranian Chrysanthemum morifolium Cultivars, using Internal Transcribed Spacer (ITS) Molecular Markers
Chrysanthemum (Chrysanthemum morifolium) is one of the most important ornamental plants which plays a significant role in the development of gardening industry in the world. The knowledge of genetic diversity is one of the prerequisite criteria for Chrysanthemum breeding with important economic goals. Molecular markers have a significant share in elucidation of inter and intra species genetic d...
متن کامل